2009 ARS Publications

Ma, J. B., Chen, X. M., Wang, M. N., and Kang, Z. S. 2009. Constructing physical and genomic maps for Puccinia striiformis f. sp. tritici, the wheat stripe rust pathogen, by comparing its EST sequences to the genomic sequence of P. graminis f. sp. tritici, the wheat stem rust pathogen. Comparative and Functional Genomics. Vol. 2009, Article ID 302620, 13 pages, 2009.
Ma, J. B., Chen, X. M., Wang, M. N., and Kang, Z. S. 2009. Constructing physical and genomic maps for Puccinia striiformis f. sp. tritici, the wheat stripe rust pathogen, by comparing its EST sequences to the genomic sequence of P. graminis f. sp. tritici, the wheat stem rust pathogen. Comparative and Functional Genomics. Vol. 2009, Article ID 302620, 13 pages, 2009.
Yin, C. T., Chen, X. M., Wang, X. J., Han Q. M., Kang, Z. S., and Hulbert, S. 2009. Generation and analysis of expression sequence tags from haustoria of the wheat stripe rust fungus Puccinia striiformis f. sp. tritici. BioMed Central Genomics 10:626.
Ma, J. B., Huang, X. L., Wang, X. J., Chen, X. M., Qu, Z. P., Huang, L. L., and Kang, Z. S. 2009. Isolation of expressed genes during compatible interaction between stripe rust (Puccinia striiformis) and wheat using a cDNA library. BioMed Central Genomics 10:586.
Miles, C., J. Roozen, S. Jones, K. Murphy, and X. M. Chen. 2009. Growing wheat in western Washington. Washington State University Extension Publication EM022E. http://cru.cahe.wsu.edu/CEPublications/EM022E/EM022E.pdf.
Wang, X. J., Tang C. L., Zhang G., Chen, X. M., Huang, L. L., and Kang Z. S. 2009. Molecular mechanism of wheat and stripe rust interaction and functional characterization of resistance-related genes. Page 54 in Abstract Book of the 12th International Cereal Rusts and Powdery Mildews Conference, October 13-16, 2009, Antalya, Turkey.
Xu, L. S., Cheng, P., Wang, M. N., Kang, Z. S., Hulbert, S., and Chen, X. M., 2009. Molecular mapping of a new gene for resistance to stripe rust in durum wheat PI 480148 and transfer the gene into common wheat. Page 67 in Abstracts of the Fourth Regional Yellow Rust Conference for Central and West Asia and North Africa. 10-12 October, 2009. Antalya, Turkey. Also in page 52 in Abstract Book of the 12th International Cereal Rusts and Powdery Mildews Conference, October 13-16, 2009, Antalya, Turkey.
Ma, J. B., Chen, X. M., Wang, M. N., and Kang, Z. S. 2009. Constructing physical and genomic maps for Puccinia striiformis by comparing EST sequences to the genomic sequence of P. graminis. Page 27 in Abstracts of the Fourth Regional Yellow Rust Conference for Central and West Asia and North Africa. 10-12 October, 2009. Antalya, Turkey.
Liu, B., Chen, X. M., and Kang, Z. S. 2009. Gene sequencing reveals heterokaryotic variations in Puccinia striiformis. Page 26 in Abstracts of the Fourth Regional Yellow Rust Conference for Central and West Asia and North Africa. 10-12 October, 2009. Antalya, Turkey.
Li, Q., Wang, M. N., and Chen, X. M. 2009. A novel gene for resistance to stripe rust in wheat genotype PI 181434. Page 21 in Abstracts of the Fourth Regional Yellow Rust Conference for Central and West Asia and North Africa. 10-12 October, 2009. Antalya, Turkey.
Chen, X. M. 2009. HTAP resistance, the key for sustainable control of stripe rust. Page 18 in Abstracts of the Fourth Regional Yellow Rust Conference for Central and West Asia and North Africa. 10-12 October, 2009. Antalya, Turkey.
Chen, X. M., Penman, L., Wan, A. M., and Cheng, P. 2009. Race changes of Puccinia striiformis f. sp. tritici and P. striiformis f. sp. hordei in the United State. Page 27 in Abstract Book of the 12th International Cereal Rusts and Powdery Mildews Conference, October 13-16, 2009, Antalya, Turkey. Also in Page 12 in Abstracts of the Fourth Regional Yellow Rust Conference for Central and West Asia and North Africa. 10-12 October, 2009. Antalya, Turkey.
Kidwell. K. K., Shelton, G. B., DeMacon, V. L., Kuehner, J. S., Baik, B., Engle, D. A., Bosque-Pérez, N. A., Burke, A., Carter, A. H., and Chen, X. M. 2009. Registration of ‘Whit’ wheat. Journal of Plant Registrations 3:279-282.
Kidwell. K. K., Shelton, G. B., DeMacon, V. L., Chen, X. M., Kuehner, J. S., Baik, B., Engle, D. A., Carter, A. H., and Bosque-Pérez, N. A. 2009. Registration of ‘Kelse’ wheat. Journal of Plant Registrations 3:269-272.
Chen, J., Souza, E. J., Zemetra, R. S. Bosque-Pérez, N. A., Guttieri, M. J., Schotzko, D., O’Brien, K. M., Windes, J. W., Guy, S. O., Brown, B. D., Chen, X. M. 2009. Registration of ‘Cataldo’ soft white spring wheat. Journal of Plant Registrations. 3:264-268.
Carter, A. H., Chen, X. M., Garland-Campbell, K., and Kidwell, K. K. 2009. Identifying QTL for high-temperature adult-plant resistance to stripe rust (Puccinia striiformis f. sp. tritici) in the
spring wheat (Triticum aestivum L.) cultivar ‘Louise’. Theoretical and Applied Genetics 119:1119-1128.
Sui, X. X., Wang, M. N., and Chen, X. M. 2009. Molecular mapping of a stripe rust resistance gene in spring wheat cultivar ‘Zak’. Phytopathology 99:1209-1215.
Chen, X. M., and Wood, D. A. 2009. Testing fungicide Evito for control of stripe rust on spring wheat, 2008. Plant Disease Management Reports 3:CF040.
Chen, X. M., and Wood, D. A. 2009. Control of stripe rust of spring wheat with foliar fungicides, 2008. Plant Disease Management Reports 3:CF039.
Chen, X. M., and Wood, D. A. 2009. Control of stripe rust of winter wheat with foliar fungicides, 2008. Plant Disease Management Reports 3:CF038.
Griffey, C. A., Thomason, W. E., Pitman, R. M., Beahm, B. R., Paling, J. J., Chen, J., Gundrum, P. G., Fanelli, J. K., Kenner, J. C., Dunaway, D. W., Brooks, W. S., Vaughn, M. E., Hokanson, E. G., Behl, H. D., Corbin, R. A., Hall, M. D., Liu, S., Custis, J. T., Waldenmaier, C. M., Starner, D. E., Gulick, S. A., Ashburn, S. R., Jones Jr., E. H., Whitt, D. L., Bockelman, H. E., Souza, E. J., Brown-Guedira, G. L., Kolmer, J. A., Long, D. L., Jin, Y., Chen, X., and Cambron, S. E. 2009. Registration of ‘5205’ wheat. Journal of Plant Registrations 3-283-288.
Griffey, C. A., Thomason, W. E., Pitman, R. M., Beahm, B. R., Paling, J. J., Chen, J., Fanelli, J. K., Kenner, J. C., Dunaway, D. W., Brooks, W. S., Vaughn, M. E., Hokanson, E.G., Behl, H. D., Corbin, R. A., Hall, M. D., Liu, S., Custis, J. T., Waldenmaier, C. M., Starner, D. E., Gulick, S. A., Ashburn, S. R., Whitt, D. L., Bockelman, H. E., Souza, E. J., Brown-Guedira, G. L., Kolmer, J. A., Long, D. L., Jin, Y., Chen, X., and Cambron, S. E. 2009. Registration of ‘USG 3555’ wheat. Journal of Plant Registrations 3:273-278.
Murphy, L. R., Santra, D., Kidwell, K., Yan, G. P., Chen, X. M., and Campbell, K. G. 2009. Linkage maps of wheat stripe rust resistance genes Yr5 and Yr15 for use in marker assisted selection. Crop Science 49:1786-1790.
Chen, X. M., Wood, D. A., Wang, M. N., Wan, A. M., Coram, T., Liu, Y. M., Sharma-Poudyal, D., Cheng, P., Zhao, J., Zhan, G. M., Sui, X. X., Liu, B., Huang, X. L., Li, Q., Ma, J. B., and Tabaccum, S. 2009. Epidemiology and control of rusts of wheat and barley. Page 30 in: 2009 Field Day Abstracts: Highlights of Research Progress. Washington State University Extension.
Wang, X. J., Ma, J. B., Li, Y., Chen, X. M., Huang, X. L., Han, Q. M., Wei, G., Huang, L. L., and Kang, Z. S. 2009. Differential gene expression in incompatible interaction between wheat and stripe rust fungus revealed by the cDNA-AFLP technique. Phytopathology 99:S138.
Wang, M. N., Li, Q., Xu, L. S., Zhao, J., Ma, J. B., and Chen, X. M. 2009. High-throughput genetic analysis and association mapping to identify novel genes for resistance to stripe rust in spring wheat germplasm. Phytopathology 99:S137.
Wan, A. M., and Chen, X. M. 2009. Races of Puccinia striiformis identified in the United States in 2008. Phytopathology 99:S137.
Sharma-Poudyal, D., and Chen, X. M. 2009. Prediction models for potential yield losses caused by wheat stripe rust in the US Pacific Northwest. Phytopathology 99:S118.
Rouse, M. N., Stoxen, S., Chen, X. M., Szabo, L. J., and Jin, Y. 2009. Diverse stem rust races found in a single field in Washington, USA. Phytopathology 99:S111.
Ma, J. B., Chen, X. M., and Kang, Z. S. 2009. Constructing physical and genomic maps for Puccinia striiformis by comparing EST sequences to the genomic sequence of P. graminis. Phytopathology 99:S78.
Liu, B., Chen, X. M., Kang, Z. S. 2009. Gene sequencing reveals heterokaryotic variations in Puccinia striiformis. Phytopathology 99:S75.
Li, Q., Wang, M. N., and Chen X. M. 2009. A novel gene for resistance to stripe rust in wheat genotype PI 181434. Phytopathology 99:S72.
Huang, X. L., Ma, J. B., Chen, X. M., Wang, X. J., Han, D. J., Qu, Z. P., Huang, L. L., Kang, Z. S. 2009. Expressed sequence tags from a SSH cDNA library identified genes involved in adult-plant resistance to stripe rust in ‘Xingzi 9104’ wheat. Phytopathology 99:S56.
Dong, Y. L., Yin, C. T., Hulbert, S., Kang, Z. S., and Chen, X. M. 2009. Cloning of putative secreted protein genes from wheat infected by Puccinia striiformis f. sp. tritici. Phytopathology 99:S29.
Cheng, P., and Chen, X. M. 2009. Somatic hybridization in Puccinia striiformis revealed by virulence patterns and microsatellite markers. Phytopathology 99:S23.
Chen, X. M., Coram, T., Huang, X., Lin, F., Zhao, J., Santra, D., Carter, A., Kidwell, K., Campbell, K., and Kang, Z. 2009. Quantitative trait loci for high-temperature adult-plant resistance to stripe rust and molecular mechanisms of the durable type of resistance. Page 20 in Poster Abstracts of Borlaug Global Rust Initiative 2009 Technical Workshop, March 17-20, 2009, Cd. Obregon, Sonora, Mexico.
Chen, X. M., Penman, L., Wan, A., and Cheng, P. 2009. Puccinia striiformis f. sp. tritici race changes in the United States. Page 6 in Poster Abstracts of Borlaug Global Rust Initiative 2009 Technical Workshop, March 17-20, 2009, Cd. Obregon, Sonora, Mexico.
Wang, X. J., Tang, C. L., Zhang, G., Li, Y. C., Wang, C. F., Liu, B., Qu, Z. P., Zhao, J., Han, Q. M., Huang, L. L., Chen X. M., and Kang, Z. S. 2009. cDNA-AFLP analysis reveals differential gene expression in compatible reaction of wheat challenged with Puccinia striiformis f. sp. tritici. BioMed Central Genomics 10:289.
Haley, S. D., Johnson, J. J., Westra, P. H., Peairs, F. B., Stromberger, J. A., Heaton, E. E., Seifert, S. A., Kottke, R. A., Rudolph, J. B., Bai, G. H., Bowden, R. L., Chen, M. S., Chen, X. M., Jin, Y., Kolmer, J. A., and Seabourn, B. W. 2009. Registration of ‘Thunder CL’ wheat. Journal of Plant Registrations. 3:181-184.
Kolmer, J., Chen, X. M., and Jin Y. 2009. Diseases which challenge global wheat production – the wheat rusts. Pages 89-124 in: Wheat: Science and Trade. B. F. Carver ed. Wiley-Blackwell, A John Wiley & Sons, Inc., Publication, Ames Iowa. 569pp.
Coram, T. E., Settles, M. L., and Chen, X. M. 2009. Large-scale analysis of antisense transcription in wheat using the Affymetrix GeneChip wheat genome array. BioMed Central Genomics 10:253-264.
Randhawa, H. S., Mutti, J. S., Kidwell, K., Morris, C., Chen, X. M., and Gill, K. S. 2009. Rapid and targeted introgression of genes into popular cultivars using marker-assisted background selection. PLoS ONE 4(6):e5752.
Lin, F., Sun, Q., Xu, S., Chen, X. M., Zhang, L., Zhang, C., Xu, Y., Miao, Q., Qu, B., Li, N., and Zhai, Q. 2009. Identification of wheat-Thinopyrum intermedium alien disomic addition lines conferring resistance to stripe rust. Canadian Journal of Plant Science 89:569-574.
Fu, D. L., Uauy, C. Distelfeld, A., Blechl, A., Epstein, L., Chen, X. M., Sela, H., Fahima, T., Dubcovsky, J. 2009. A kinase-START gene confers temperature-dependent resistance to wheat stripe rust. Science 323:1357-1360.
Vazquez, M. D., A. Heesacker, A., Peterson, C. J., Chen, X. M., Ammar, K., Leonard, J. M., and Riera-Lizarazu, O. 2009. Localization of genetic factors controlling stripe rust resistance in a recombinant inbred line population derived from the Stephens X Platte cross. Abstract of PAG meeting. On line http://www.intl-pag.org/17/abstracts/W61_PAGXVII_307.html.
Dubcovsky, J., Fu, D. L., Uauy, C., Blechl, A., Epstein, L., Chen, X. M., Distelfeld, A., Sela, H., and Fahima Z. 2009. Positional cloning of a QTL for slow rusting in wheat. Abstracts of the XVII Plant and Animal Genome Conference. On line http://www.intl-pag.org/17/abstracts/W61_PAGXVII_426.html.
Lin, F., and Chen, X. M. 2009. Quantitative trait loci for non-race-specific, high-temperature adult-plant resistance to stripe rust in wheat cultivar Express. Theoretical and Applied Genetics 118:631-642.
Li, Y., Niu, Y. C., and Chen, X. M. 2009. Mapping a stripe rust resistance gene YrC591 in wheat variety C591 with SSR and AFLP markers. Theoretical and Applied Genetics 118:339-346.
Zhang, L., Lavery, L., Gill, U., Gill, K., Steffenson, B., Yan, G. P., Chen, X. M., and Kleinhofs, A. 2009. A cation/proton-exchanging protein is a candidate for the barley NecS1 gene controlling necrosis and enhanced defense response to stem rust. Theoretical and Applied Genetics 118:385-397.