2017 ARS Publications

Bruckner, P., Berg, J., Kephart, K., Stougaard, R., Pradhan, G., Lamb, P., Miller, J., Briar, S., Chen, C. C., Nash, D. Holen, D., Cook, J., Gale, S., Jin, Y., Kolmer, J., Chen, X. M., Bai, G. H., and Murray, T. 2017. Registration of ‘Loma’ hard red winter wheat. Journal of Plant Registrations 11(3):281-284. doi:10.3198/jpr2016.12.0072crc

Carter, A. H., Jones, S. S., Balow, K. A., Shelton, G. B., Burke, A. B., Higginbotham, R. W., Chen, X. M., Engle, D. A., Murray, T. D., and Morris, C. F. 2017. Registration of ‘Jasper’ soft white winter wheat. Journal of Plant Registrations 11(3):263-268. doi:10.3198/jpr2016.09.0051crc

Carter, A. H., Jones, S. S., Lyon, S. R., Balow, K. A., Shelton, G. B., Burke, A., Higginbotham, R. W., Schillinger, W. F., Chen, X. M., Engle, D. A., and Morris, C. F. 2017. Registration of ‘Sequoia’ hard red winter wheat. Journal of Plant Registrations 11(3):269-274. doi:10.3198/jpr2016.09.0052crc

Carter, A. H., Kidwell, K. K., Balow, K. A., Burke, A., Shelton, G. B., Higginbotham, R. W., DeMacon, V., Lewien, M. J., Chen, X. M., Engle, D. A. and Morris, C. F.  2017. Registration of ‘Earl’ wheat. Journal of Plant Registrations 11(3):275-280. doi:10.3198/jpr2016.09.0054crc

Chen, X. M. 2017. Chapter 4 Stripe rust epidemiology.  Pages 283-352 in: Chen XM, Kang ZS (eds) Stripe Rust. Springer, Dordrecht.  DOI 10.1007/978-94-024-1111-9, ISBN 978-94-024-1109-6 (print), 978-94-024-1111-9 (online), http://link.springer.com/book/10.1007/978-94-024-1111-9 (0000339107)

Chen, X. M., Evans, C. K., Sprott, J., and Liu, Y. M. 2017. Evaluation of spring wheat cultivars to fungicide application for control of stripe rust in 2016. Plant Disease Management Reports 11:CF014 http://www.plantmanagementnetwork.org/pub/trial/PDMR/volume11/

Chen, X. M., Evans, C. K., Sprott, J., and Liu, Y. M. 2017. Evaluation of winter wheat cultivars to fungicide application for control of stripe rust in 2016. Plant Disease Management Reports 11:CF015 http://www.plantmanagementnetwork.org/pub/trial/PDMR/volume11/

Chen, X. M., Evans, C. K., Sprott, J., and Liu, Y. M. 2017. Control of stripe rust of winter wheat with foliar fungicides in 2016.  Plant Disease Management Reports 11:CF016. http://www.plantmanagementnetwork.org/pub/trial/PDMR/volume11/

Chen, X. M., Evans, C. K., Sprott, J., and Liu, Y. M. 2017. Control of stripe rust of spring wheat with foliar fungicides in 2016. Plant Disease Management Reports 11:CF022. http://www.plantmanagementnetwork.org/pub/trial/PDMR/volume11/

Chen, X. M., and Kang, Z. S. 2017. Chapter 1 Introduction: history of research, symptoms, taxonomy of the pathogen, host range, distribution, and impact of stripe rust. Pages 1-33 in: Chen XM, Kang ZS (eds) Stripe Rust. Springer, Dordrecht. DOI 10.1007/978-94-024-1111-9, ISBN 978-94-024-1109-6 (print), 978-94-024-1111-9 (online), http://link.springer.com/book/10.1007/978-94-024-1111-9 (0000339107)

Chen, X. M., and Kang, Z. S. 2017. Chapter 6 Integrated control of stripe rust. Pages 559-599 in: Chen XM, Kang ZS (eds) Stripe Rust. Springer, Dordrecht. DOI 10.1007/978-94-024-1111-9, ISBN 978-94-024-1109-6 (print), 978-94-024-1111-9 (online). http://link.springer.com/book/10.1007/978-94-024-1111-9 (0000339110)

Chen, X. M., and Kang, Z. S. 2017. Chapter 7 Stripe rust research and control: conclusions and perspectives. Pages 601-630 in: Chen XM, Kang ZS (eds) Stripe Rust. Springer, Dordrecht. DOI 10.1007/978-94-024-1111-9, ISBN 978-94-024-1109-6 (print), 978-94-024-1111-9 (online), http://link.springer.com/book/10.1007/978-94-024-1111-9 (0000339113)

Cuomo, C. A., Bakkeren, G., Khalil, H. B., Panwar, V., Joly, D., Linning, R., Sakthikumar, S., Song, X., Adiconis, X., Fan, L., Goldberg, J. M., Levin, J. Z., Young, S., Zeng, Q. D., Anikster, Y., Bruce, M., Wang, M. N., Yin, C. T., McCallum, B., Szabo, L. J., Hulbert, S., Chen, X. M., and Fellers, J. P. 2017. Comparative analysis highlights variable genome content of wheat rusts and divergence of the mating loci.  3G: Genes, Genomes, Genomics 7(2):371-376. doi:10.1534/g3.116.032797

Dong, Z. Z., Hegarty, J. W., Zhang, J. L., Zhang, W. J., Chao, S. M., Chen, X. M., Zhou, Y. H., Dubcovsky, J. 2017. Validation and characterization of a QTL for adult plant resistance to stripe rust on wheat chromosome arm 6BS (Yr78). Theoretical and Applied Genetics 130(10):2127-2137. doi:10.1007/s00122-017-2946-9

Garland Campbell, K., Carter, A. H., Jones, S. S., Chen, X. M., DeMacon. P., Higginbotham, R., Engle. D., Guy, S. O., Mundt, C. C., Murray, T. D., Morris, C. F., See, D. 2017. Registration of ‘Pritchett’ soft white winter club wheat. Journal of Plant Registrations 11:152–158. doi:10.3198/jpr2016.04.0018crc

Haley, S. D., Johnson, J. J., Peairs, F. B., Stromberger, J. A., Hudson-Arns, E. E., Seifert, S. A., Anderson, V. A., Bai, G. H., Chen, X. M., Bowden, R. L., Jin, Y., Kolmer, J. A., Chen, M. S., and Seabourn, B. W. 2017. Registration of ‘Sunshine’ hard white winter wheat. Journal of Plant Registrations 11(3):289-294. doi:10.3198/jpr2016.12.0075crc

Johnson, J. W., Chen, Z., Buck, J. W., Buntin, G. D., Babar, M. A., Mason, R. E., Harrison, S. A., Murphy, J. P., Ibrahim, A. M. H., Sutton, R. L., Simoneaux, B. E., Bockelman, H. E., Baik, B. K., Marshall, D., Cowger, C., Brown-Guedira, G. L., Kolmer, J. A., Jin, Y., Chen, X. M., and Cambron, S. E., and Mergoum, M. 2017. ‘GA 03564-12E6’: A high yielding soft red winter wheat cultivar adapted to Georgia and the south east regions of the USA. Journal of Plant Registrations 11(2):159-164.  http://dl.sciencesocieties.org/publications/jpr/articles/11/2/159

Kandel, J. S., Krishnan, V., Jiwan, D., Chen, X. M., Skinner, D. Z. and See, D. R. 2017. Mapping genes for resistance to stripe rust in spring wheat landrace PI 480035. PLoS One 12(5):e0177898. https://doi.org/10.1371/journal.pone.0177898

Kang, Z. S., Tang, C. L., Zhao, J., Cheng, Y. L., Liu, J., Guo, J., Wang, X. J., and Chen X. M. 2017. Chapter 3: Wheat-Puccinia striiformis interactions. Pages 155-282 in: Chen XM, Kang ZS (eds) Stripe Rust. Springer, Dordrecht.  DOI 10.1007/978-94-024-1111-9, ISBN 978-94-024-1109-6 (print), 978-94-024-1111-9 (online), http://link.springer.com/book/10.1007/978-94-024-1111-9 (0000339107)

Kirby, E. M., Paulitz, T. C., Murray, T. D., Schroeder, K. L., and Chen, X. M. 2017. Chapter 10: Disease Management for Wheat and Barley. Pages 399-468 In: Yorgey, G. and C. Kruger, eds. Advances in Sustainable Dryland Farming in the Inland Pacific Northwest, Washington State University Extension Publication EM108, Pullman, WA, http://extension.wsu.edu/publications/pubs/em108/

Kumar, N., Randhawa, H. S., Higginbotham, R. W., Chen, X. M., Murray, T. D., and Gill, K. S. 2017. Targeted and efficient transfer of multiple value-added genes into wheat varieties.  Molecular Breeding 37:68. DOI 10.1007/s11032-017-0649-1

Lei, Y., Wang, M. N., Wan, A. M., Xia, C. J., See, D. R., Zhang, M., and Chen, X. M. 2017. Virulence and molecular characterization of experimental isolates of the stripe rust pathogen (Puccinia striiformis) indicate somatic recombination. Phytopathology 107:329-344. http://dx.doi.org/10.1094/PHYTO-07-16-0261-R

Liu, W. Z., Macaferri, M., Bulli, P., Rynearson, S., Tuberosa, R., Chen, X. M., and Pumphrey, M. 2017. Genome-wide association mapping of seedling and field resistance to Puccinia striiformis f. sp. tritici in elite global durum wheat. Theoretical and Applied Genetics 130(4):649–667. DOI 10.1007/s00122-016-2841-9

Liu, W. Z., Maccaferri, M., Chen, X. M., Pumphrey, M., Laghetti, G., Pignone, D., and Tuberosa, R. 2017. Genome-wide association mapping reveals a rich genetic architecture of stripe rust resistance loci in emmer wheat (Triticum turgidum ssp. dicoccum). Theoretical and Applied Genetics 130(11):2249-2270. DOI 10.1007/s00122-017-2957-6

Liu, W. Z., Macaferri, M., Rynearson, S., Letta, T., Zegeye, H., Tuberosa, R., Chen, X. M., and Pumphrey, M. 2017. Novel sources of stripe rust resistance identified by genome-wide association mapping in Ethiopian durum wheat (Triticum turgidum ssp. durum). Frontiers in Plant Science 8:774 (1-15) doi: 10.3389/fpls.2017.00774.

Liu, T. L., Wan, A. M., Liu, D. C., and Chen, X. M. 2017. Changes of races and virulence genes of Puccinia striiformis f. sp. tritici, the wheat stripe rust pathogen, in the United States from 1968 to 2009. Plant Disease 101(8):1522-1532. http://doi.org/10.1094/PDIS-12-16-1786-RE

Muleta, K. T., Bulli, P., Rynearson, S., Chen, X. M., and Pumphrey M. 2017. Loci associated with resistance to stripe rust (Puccinia striiformis f. sp. tritici) in a core collection of spring wheat (Triticum aestivum). PLoS One 12(6):e0179087. https://doi.org/10.1371/journal.pone.0179087.

Muleta, K. T., Bulli, P., Zhang, Z. W., Chen, X. M., and Pumphrey, M. 2017. Unlocking diversity in germplasm collections by genomic selection: a case study based on quantitative adult plant resistance to stripe rust (Puccinia striiformis f. sp. tritici) in spring wheat. The Plant Genome 10(3):1-15. doi:10.3835/plantgenome2016.12.0124

Muleta, K. T., Rouse, M. N., Rynearson, S., Chen X. M., Buta, B. G., Pumphrey, M. O. 2017. Characterization of molecular diversity and genome-wide mapping of loci associated with resistance to stripe rust and stem rust in Ethiopian bread wheat accessions. BMC Plant Biology 17(1):134. DOI 10.1186/s12870-017-1082-7,

Wan, A. M., Wang, X. J., Kang, Z. S., and Chen, X. M. 2017. Chapter 2 Variability of the stripe rust pathogen. Pages 35-154 in: Chen XM, Kang ZS (eds) Stripe Rust. Springer, Dordrecht.  DOI 10.1007/978-94-024-1111-9, ISBN 978-94-024-1109-6 (print), 978-94-024-1111-9 (online), http://link.springer.com/book/10.1007/978-94-024-1111-9 (0000339107)

Wang, M. N., and Chen, X. M. 2017. Chapter 5 Stripe rust resistance. Pages 353-558 in: Chen XM, Kang ZS (eds) Stripe Rust. Springer, Dordrecht. DOI 10.1007/978-94-024-1111-9, ISBN 978-94-024-1109-6 (print), 978-94-024-1111-9 (online), http://link.springer.com/book/10.1007/978-94-024-1111-9 (0000339108)

Wang, J. J., Tao, F., Tian, W., Guo Z. F., Chen, X. M., Xu, X. M., Shang, H. S., and Hu, X. P. 2017. The wheat WRKY transcription factors TaWRKY49 and TaWRKY62 confer differential high-temperature seedling-plant resistance to Puccinia striiformis f. sp. tritici. PLoS One 12(7): e0181963. http://doi.org/10.1371/journal.pone.0181963.

Wu, J. H., Wang, Q. L., Chen, X. M., Liu, S. J., Li, H. Y., Zeng, Q. D., Mu, J. M., Dai, M. F., Han, D. J, and Kang, Z. S. 2017. Development and validation of SNP markers for QTL underlying resistance to stripe rust in common wheat P10057. Plant Disease 101(12):2079-2087. http://apsjournals.apsnet.org/doi/pdf/10.1094/PDIS-04-17-0468-RE

Xia, C. J., Wang, M. N., Cornejo, O. E., Jiwan, D. A., See, D. R., and Chen, X. M. 2017. Secretome characterization and correlation analysis reveal putative pathogenicity mechanisms and identify candidate avirulence genes in the wheat stripe rust fungus Puccinia striiformis f. sp. tritici. Frontiers in Microbiology 8:2394. doi: 10.3389/fmicb.2017.02394